Plot Module

• Plot Module : Getting started
  • Curation
  • Plugins
    • Create your own plugin !
  • Create a property
  • Simulation

• MorphoNet.Plot Documentation
  • Annotation
  • Dataset
    • Dataset.add_seed()
    • Dataset.cancel()
    • Dataset.end_step()
    • Dataset.export()
    • Dataset.get_actions()
    • Dataset.get_all_objects()
    • Dataset.get_center()
    • Dataset.get_channels()
    • Dataset.get_last_step()
    • Dataset.get_mask_cell()
    • Dataset.get_mesh()
    • Dataset.get_object()
    • Dataset.get_objects()
    • Dataset.get_objects_at()
    • Dataset.get_seeds()
    • Dataset.get_times()
    • Dataset.get_version_glob_channels_at()
    • Dataset.np_where()
    • Dataset.restart()
    • Dataset.set_seg()
    • Dataset.start_step()
    • Dataset.update_cells_at()
  • Object
  • Property
    • Property.get_key_value_pairs()
    • Property.get_txt()
    • Property.read()
    • Property.set()
  • ScikitProperty
    • ScikitProperty.get_key_value_pairs()
    • ScikitProperty.get_values()

• MorphoPlugin
  • MorphoPlugin
    • MorphoPlugin.add_coordinates()
    • MorphoPlugin.add_dropdown()
    • MorphoPlugin.add_filepicker()
    • MorphoPlugin.add_filesaver()
    • MorphoPlugin.add_inputfield()
    • MorphoPlugin.add_toggle()
    • MorphoPlugin.filter_objects()
    • MorphoPlugin.gaussian_rawdata()
    • MorphoPlugin.get_coordinates()
    • MorphoPlugin.get_dropdown()
    • MorphoPlugin.get_filepicker()
    • MorphoPlugin.get_filesaver()
    • MorphoPlugin.get_inputfield()
    • MorphoPlugin.get_log()
    • MorphoPlugin.get_toggle()
    • MorphoPlugin.restart()
    • MorphoPlugin.set_description()
    • MorphoPlugin.set_icon_name()
    • MorphoPlugin.set_image_name()
    • MorphoPlugin.set_name()
    • MorphoPlugin.set_parent()
    • MorphoPlugin.start()
• Default Plugins
  • Plugins
    • De Novo Segmentation plugins
      • Cellpose-Predict plugin
        • CellposePredict
      • Cellpose-Train plugin
        • CellposeTrain
      • Mars plugin
        • Mars
      • Stardist-Predict plugin
        • StardistPredict
      • Stardist-Train plugin
        • StardistTrain
        • augmenter()
      • Binarize plugin
        • Binarize
      • BinCha plugin
        • BinCha
      • BinBox plugin
        • BinBox
    • De Novo Seed plugins
      • Seedax plugin
        • Seedax
      • Seedero plugin
        • Seedero
      • Seedin plugin
        • Seedin
      • Seedio plugin
        • Seedio
      • Seedis plugin
        • Seedis
    • Segmentation from Seeds Plugins
      • Wata plugin
        • Wata
      • Wati plugin
        • Wati
      • Watio plugin
        • Watio
      • Wato plugin
        • Wato
    • Segmentation correction Plugins
      • Delete plugin
        • Delete
      • CleanUp plugin
        • CleanUp
      • Disco plugin
        • Disco
      • Fuse plugin
        • Fuse
      • Gaumi plugin
        • Gaumi
      • Splax plugin
        • Splax
      • Copy-paste plugin
        • CopyPaste
      • Match plugin
        • Match
    • Shape Transform Plugins
      • Close plugin
        • Close
      • Convex plugin
        • Convex
      • Dilate plugin
        • Dilate
      • Erode plugin
        • Erode
      • Open plugin
        • Open
      • Deform plugin
        • Deform
    • Edit temporal links Plugins
      • Addlink Plugin
        • Addlink
      • Delink Plugin
        • Delink
      • Tracko Plugin
        • Tracko
        • get_iou_bbox()
    • Propagate segmentation Plugins
      • Propa Plugin
        • Propa
      • Prope Plugin
        • Prope

• Plot Examples